AI Uncovered: Introducing Darktrace Incident Graph Evaluation for Security Threats (DIGEST)
Discover how Darktrace’s new DIGEST model enhances Cyber AI Analyst by using GNNs and RNNs to score and prioritize threats with expert-level precision before damage is done.
Darktrace cyber analysts are world-class experts in threat intelligence, threat hunting and incident response, and provide 24/7 SOC support to thousands of Darktrace customers around the globe. Inside the SOC is exclusively authored by these experts, providing analysis of cyber incidents and threat trends, based on real-world experience in the field.
Written by
Margaret Cunningham, PhD
VP, Security & AI Strategy, Field CISO
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16
Apr 2025
DIGEST advances how Cyber AI Analyst scores and prioritizes incidents. Trained on over a million anonymized incident graphs, our model brings deeper context to severity scoring by analyzing how threats are structured and how they evolve. DIGEST assesses threats as an expert, before damage is done. For more details beyond this overview, please read our Technical Research Paper.
To build DIGEST, we combined Graph Neural Networks (GNNs) to interpret incident structure with Recurrent Neural Networks (RNNs) to analyze how incidents evolve over time. This pairing allows DIGEST to reliably determine the potential severity of an incident even at an early stage to give the Cyber AI Analyst a critical edge in identifying high-risk threats early and recognizing when activity is unlikely to escalate.
DIGEST works locally in real-time regardless of whether your Darktrace deployment is on prem or in the cloud, without requiring data to be sent externally for decisions to be made. It was built to support teams in all environments, including those with strict data controls and limited connectivity.
Our approach to AI is unique, drawing inspiration from multiple disciplines to tackle the toughest cybersecurity challenges. DIGEST demonstrates how a novel application of GNNs and RNNs improves the prioritization and triage of security incidents. By blending interdisciplinary expertise with innovative AI techniques, we are able to push the boundaries of what’s possible and deliver it where it is needed most. We are eager to share our findings to accelerate progress throughout the broader field of AI development.
DIGEST: Pattern, progression, and prioritization
Most security incidents start quietly. A device contacting an unusual domain. Credentials are used at unexpected hours. File access patterns shift. The fundamental challenge is not always detecting these anomalies but knowing what to address first. DIGEST gives us this capability.
To understand DIGEST, it helps to start with Cyber AI Analyst, a critical component of our Self-Learning AI system and a front-line triage partner in security investigations. It combines supervised and unsupervised machine learning (ML) techniques, natural language processing (NLP), and graph-based reasoning to investigate and summarize security incidents.
DIGEST was built as an additional layer of analysis within Cyber AI Analyst. It enhances its capabilities by refining how incidents are scored and prioritized, helping teams focus on what matters most more quickly. For a general view of the ML and AI methods that power Darktrace products, read our AI Arsenal whitepaper. This paper provides insights regarding the various approaches we use to detect, investigate, and prioritize threats.
Cyber AI Analyst is constantly investigating alerts and produces millions of critical incidents every year. The dynamic graphs produced by Cyber AI Analyst investigations represent an abstract understanding of security incidents that is fully anonymized and privacy preserving. This allowed us to use the Call Home and aianalyst.darktrace.com services to produce a dataset comprising the broad structure of millions of incidents that Cyber AI analyst detected on customer deployments, without containing any sensitive data. (Read our technical research paper for more details about our dataset).
The dynamic graphs from Cyber AI Analyst capture the structure of security incidents where nodes represent entities like users, devices or resources, and edges represent the multitude of relationships between them. As new activity is observed, the graph expands, capturing the progression of incidents over time. Our dataset contained everything from benign administrative behavior to full-scale ransomware attacks.
Unique data, unmatched insights
Key terms
Graph Neural Networks (GNNs): A type of neural network designed to analyze and interpret data structured as graphs, capturing relationships between nodes.
Recurrent Neural Networks (RNNs): A type of neural network designed to model sequences where the order of events matters, like how activity unfolds in a security incident.
The Cyber AI Analyst dataset used to train DIGEST reflects over a decade of work in AI paired with unmatched expertise in cybersecurity. Prior to training DIGEST on our incident graph data set, we performed rigorous data preprocessing to ensure to remove issues such as duplicate or ill-formed incidents. Additionally, to validate DIGEST’s outputs, expert security analysts assessed and verified the model’s scoring.
Transforming data into insights requires using the right strategies and techniques. Given the graphical nature of Cyber AI Analyst incident data, we used GNNs and RNNs to train DIGEST to understand incidents and how they are likely to change over time. Change does not always mean escalation. DIGEST’s enhanced scoring also keeps potentially legitimate or low-severity activity from being prioritized over threats that are more likely to get worse. At the beginning, all incidents might look the same to a person. To DIGEST, it looks like the beginning of a pattern.
As a result, DIGEST enhances our understanding of security incidents by evaluating the structure of the incident, probable next steps in an incident’s trajectory, and how likely it is to grow into a larger event.
To illustrate these capabilities in action, we are sharing two examples of DIGEST’s scoring adjustments from use cases within our customers’ environments.
First, Figure 1 shows the graphical representation of a ransomware attack, and Figure 2 shows how DIGEST scored incident progression of that ransomware attack. At hour two, DIGEST’s score escalated to 95% well before observation of data encryption. This means that prior to seeing malicious encryption behaviors, DIGEST understood the structure of the incident and flagged these early activities as high-likelihood precursors to a severe event. Early detection, especially when flagged prior to malicious encryption behaviors, gives security teams a valuable head start and can minimize the overall impact of the threat, Darktrace Autonomous Response can also be enabled by Cyber AI Analyst to initiate an immediate action to stop the progression, allowing the human security team time to investigate and implement next steps.
Figure 1: Graph representation of a ransomware attack
Figure 2: Timeline of DIGEST incident score escalation. Note that timestep does not equate to hours, the spike in score to 95% occurred approximately 2 hours into the attack, prior to data encryption.
In contrast, our second example shown in Figure 3 and Figure 4 illustrates how DIGEST’s analysis of an incident can help teams avoid wasting time on lower risk scenarios. In this instance, Figure 3 illustrates a graph of unusual administrative activity, where we observed connection to a large group of devices. However, the incident score remained low because DIGEST determined that high risk malicious activity was unlikely. This determination was based on what DIGEST observed in the incident's structure, what it assessed as the probable next steps in the incident lifecycle and how likely it was to grow into a larger adverse event.
Figure 3: Graph representation of unusual admin activity connecting to a large group of devices.
Figure 4: Timeline of DIGEST incident scoring, where the score remained low as the unusual event was determined to be low risk.
These examples show the value of enhanced scoring. DIGEST helps teams act sooner on the threats that count and spend less time chasing the ones that do not.
The next phase of advanced detection is here
Darktrace understands what incidents look like. We have seen, investigated, and learned from them at scale, including over 90 million investigations in 2024. With DIGEST, we can share our deep understanding of incidents and their behaviors with you and triage these incidents using Cyber AI Analyst.
Our ability to innovate in this space is grounded in the maturity of our team and the experiences we have built upon in over a decade of building AI solutions for cybersecurity. This experience, along with our depth of understanding of our data, techniques, and strategic layering of AI/ML components has shaped every one of our steps forward.
With DIGEST, we are entering a new phase, with another line of defense that helps teams prioritize and reason over incidents and threats far earlier in an incident’s lifecycle. DIGEST understands your incidents when they start, making it easier for your team to act quickly and confidently.
DIGEST is available in Darktrace 6.3, along with a new embedding model – DEMIST-2 – designed to provide reliable, high-accuracy detections for critical security use cases.
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Want to learn more?
If you are curious about the details of DIGEST’s dataset, model design, training, experiments, and model deployment, read our technical brief.
Darktrace cyber analysts are world-class experts in threat intelligence, threat hunting and incident response, and provide 24/7 SOC support to thousands of Darktrace customers around the globe. Inside the SOC is exclusively authored by these experts, providing analysis of cyber incidents and threat trends, based on real-world experience in the field.
AI is accelerating cyberattacks beyond the pace of patching, exposing a growing gap between vulnerability discovery and remediation. This blog explores why prevention-first security can no longer keep up with AI-driven threats. It also outlines how Darktrace’s behavioral AI enables organizations to detect and contain attacks instantly even when vulnerabilities are unknown or unpatched.
7 MCP Risks CISO’s Should Consider and How to Prepare
As Model Context Protocol (MCP) becomes the control plane for autonomous AI agents, it creates a new and largely ungoverned security attack surface. This article outlines the key MCP risks CISOs must address and why governance and visibility are now essential.
How to Secure AI and Find the Gaps in Your Security Operations
As AI adoption accelerates, security teams face growing risk across interconnected systems. This blog explores why siloed tools fall short, how lifecycle thinking helps, and how to ensure your security functions work together.
How AI is breaking the patch-and-prevent security model
The business world was upended last week by the news that Anthropic has developed a powerful new AI model, Claude Mythos, which poses unprecedented risk because of its ability to expose flaws in IT systems.
Whether it’s Mythos or OpenAI’s GPT-5.4-Cyber, which was just announced on Tuesday, supercharged AI models in the hands of hackers will allow them to carry out attacks at machine speed, much faster than most businesses can stop them.
This news underscores a stark reality for all leaders: Patching holes alone is not a sufficient control against modern cyberattacks. You must assume that your software is already vulnerable right now. And while LLMs are very good at spotting vulnerabilities, they’re pretty bad at reliably patching them.
Project Glasswing members say it could take months or years for patches to be applied. While that work is done, enterprises must be protected against Zero-Day attacks, or security holes that are still undiscovered.
Most cybersecurity strategies today are built like a daily multivitamin: broad, preventative, and designed to keep the system generally healthy over time. Patch regularly. Update software. Reduce known vulnerabilities. It’s necessary, disciplined, and foundational. But it’s also built for a world where the risks are well known and defined, cycles are predictable, and exposure unfolds at a manageable pace.
What happens when that model no longer holds?
The AI cyber advantage: Behavioral AI
The vulnerabilities exposed by AI systems like Mythos aren’t the well-understood risks your “multivitamin” was designed to address. They are transient, fast-emerging entry points that exist just long enough to be exploited.
In that environment, prevention alone isn’t enough. You don’t need more vitamins—you need a painkiller. The future of cybersecurity won’t be defined by how well you maintain baseline health. It will be defined by how quickly you respond when something breaks and every second counts.
That’s why behavioral AI gives businesses a durable cyber advantage. Rather than trying to figure out what the attacker looks like, it learns what “normal” looks like across the digital ecosystem of each individual business.
That’s exactly how behavioral AI works. It understands the self, or what's normal for the organization, and then it can spot deviations in from normal that are actually early-stage attacks.
The Darktrace approach to cybersecurity
At Darktrace, we’ve been defending our 10,000 customers using behavioral AI cybersecurity developed in our AI Research Centre in Cambridge, U.K.
Darktrace was built on the understanding that attacks do not arrive neatly labeled, and that the most damaging threats often emerge before signatures, indicators, or public disclosures can catch up.
Our AI algorithms learn in real time from your personalized business data to learn what’s normal for every person and every asset, and the flows of data within your organization. By continuously understanding “normal” across your entire digital ecosystem, Darktrace identifies and contains threats emerging from unknown vulnerabilities and compromised supply chain dependencies, autonomously curtailing attacks at machine speed.
As AI reshapes how vulnerabilities are found and exploited, cybersecurity must be anchored in something more durable than a list of known flaws. It requires a real-time understanding of the business itself: what belongs, what does not, and what must be stopped immediately.
What leaders should do right now
The leadership priority must shift accordingly.
First, stop treating unknown vulnerabilities as an edge case. AI‑driven discovery makes them the norm. Security programs built primarily around known flaws, signatures, and threat intelligence will always lag behind an attacker that is operating in real time.
Second, insist on an understanding of what is actually normal across the business. When threats are novel, labels are useless. The earliest and most reliable signal of danger is abnormal behavior—systems, users, or data flows that suddenly depart from what is expected. If you cannot see that deviation as it happens, you are effectively blind during the most critical window.
Finally, assume that the next serious incident will occur before remediation guidance is available. Ask what happens in those first minutes and hours. The organizations that maintain resilience are not the ones waiting for disclosure cycles to catch up—they are the ones that can autonomously identify and contain emerging threats as they unfold.
This is the reality of cybersecurity in an AI‑shaped world. Patching and prevention remain important foundations, but the advantage now belongs to those who can respond instantly when the unpredictable occurs.
Behavioral AI is security designed not just for known threats, but for the ones that AI will discover next.
Inside ZionSiphon: Darktrace’s Analysis of OT Malware Targeting Israeli Water Systems
What is ZionSiphon?
Darktrace recently analyzed a malware sample, which identifies itself as ZionSiphon. This sample combines several familiar host-based capabilities, including privilege escalation, persistence, and removable-media propagation, with targeting logic themed around water treatment and desalination environments.
This blog details Darktrace’s investigation of ZionSiphon, focusing on how the malware identifies targets, establishes persistence, attempts to tamper with local configuration files, and scans for Operational Technology (OT)-relevant services on the local subnet. The analysis also assesses what the code suggests about the threat actor’s intended objectives and highlights where the implementation appears incomplete.
Figure 1: Function “ZionSiphon()” used by the malware author.
Targets and motivations
Israel-Focused Targeting and Messaging
The clearest indicators of intent in this sample are its hardcoded Israel-focused targeting checks and the strong political messaging found in some strings in the malware’s binary.
In the class initializer, the malware defines a set of IPv4 ranges, including “2.52.0.0-2.55.255.255”, “79.176.0.0-79.191.255.255”, and “212.150.0.0-212.150.255.255”, indicating that the author intended to restrict execution to a narrow range of addresses. All of the specified IP blocks are geographically located within Israel.
Figure 2: The malware obfuscates the IP ranges by encoding them in Base64.
The ideological motivations behind this malware are also seemingly evident in two Base64-encoded strings embedded in the binary. The first (shown in Figure 1) is:
“Netanyahu = SW4gc3VwcG9ydCBvZiBvdXIgYnJvdGhlcnMgaW4gSXJhbiwgUGFsZXN0aW5lLCBhbmQgWWVtZW4gYWdhaW5zdCBaaW9uaXN0IGFnZ3Jlc3Npb24uIEkgYW0gIjB4SUNTIi4=“, which decodes to “In support of our brothers in Iran, Palestine, and Yemen against Zionist aggression. I am "0xICS".
The second string, “Dimona = UG9pc29uaW5nIHRoZSBwb3B1bGF0aW9uIG9mIFRlbCBBdml2IGFuZCBIYWlmYQo=“, decodes to “Poisoning the population of Tel Aviv and Haifa”. These strings do not appear to be used by the malware for any operational purpose, but they do offer an indication of the attacker’s motivations. Dimona, referenced in the second string, is an Israeli city in the Negev desert, primarily known as the site of the Shimon Peres Negev Nuclear Research Center.
Figure 3: The Dimona string as it appears in the decompiled malware, with the Base64-decoded text.
The hardcoded IP ranges and propaganda‑style text suggest politically motivated intent, with Israel appearing to be a likely target.
Water and desalination-themed targeting?
The malware also includes Israel-linked strings in its target list, including “Mekorot, “Sorek”, “Hadera”, “Ashdod”, “Palmachim”, and “Shafdan”. All of the strings correspond to components of Israel’s national water infrastructure: Mekorot is Israel’s national water company responsible for managing the country’s water system, including major desalination and wastewater projects. Sorek, Hadera, Ashdod, and Palmachim are four of Israel’s five major seawater desalination plants, each producing tens of millions of cubic meters of drinking water annually. Shafdan is the country’s central wastewater treatment and reclamation facility. Their inclusion in ZionSiphon’s targeting list suggests an interest in infrastructure linked to Israel’s water sector.
Figure 4: Strings in the target list, all related to Israel and water treatment.
Beyond geographic targeting, the sample contains a second layer of environment-specific checks aimed at water treatment and desalination systems. In the function ”IsDamDesalinationPlant()”, the malware first inspects running process names for strings such as “DesalPLC”, “ROController”, “SchneiderRO”, “DamRO”, “ReverseOsmosis”, “WaterGenix”, “RO_Pump”, “ChlorineCtrl”, “WaterPLC”, “SeaWaterRO”, “BrineControl”, “OsmosisPLC”, “DesalMonitor”, “RO_Filter”, “ChlorineDose”, “RO_Membrane”, “DesalFlow”, “WaterTreat”, and “SalinityCtrl”. These strings are directly related to desalination, reverse osmosis, chlorine handling, and plant control components typically seen in the water treatment industry.
The filesystem checks reinforce this focus. The code looks for directories such as “C:\Program Files\Desalination”, “C:\Program Files\Schneider Electric\Desal”, “C:\Program Files\IDE Technologies”, “C:\Program Files\Water Treatment”, “C:\Program Files\RO Systems”, “C:\Program Files\DesalTech”, “C:\Program Files\Aqua Solutions”, and “C:\Program Files\Hydro Systems”, as well as files including “C:\DesalConfig.ini”, “C:\ROConfig.ini”, “C:\DesalSettings.conf”, “C:\Program Files\Desalination\system.cfg”, “C:\WaterTreatment.ini”, “C:\ChlorineControl.dat”, “C:\RO_PumpSettings.ini”, and “C:\SalinityControl.ini.”
Malware Analysis
Privilege Escalation
Figure 5: The “RunAsAdmin” function from the malware sample.
The malware’s first major action is to check whether it is running with administrative rights. The “RunAsAdmin()” function calls “IsElevated()”, which retrieves the current Windows identity and checks whether it belongs to the local Administrators group. If the process is already elevated, execution proceeds normally.
Figure 6: The “IsElevated” function as seen in the sample.
If not, the code waits on the named mutex and launches “powershell.exe” with the argument “Start-Process -FilePath <current executable> -Verb RunAs”, after which it waits for that process to finish and then exits.
Persistence and stealth installation
Figure 7: Registry key creation.
Persistence is handled by “s1()”. This routine opens “HKCU\Software\Microsoft\Windows\CurrentVersion\Run”, retrieves the current process path, and compares it to “stealthPath”. If the current file is not already running from that location, it copies itself to the stealth path and sets the copied file’s attributes to “hidden”.
The code then creates a “Run” value named “SystemHealthCheck” pointing to the stealth path. Because “stealthPath” is built from “LocalApplicationData” and the hardcoded filename “svchost.exe”, the result is a user-level persistence mechanism that disguises the payload under a familiar Windows process name. The combination of a hidden file and a plausible-sounding autorun value suggests an intent to blend into ordinary Windows artifacts rather than relying on more complex persistence methods.
Target determination
The malware’s targeting determination is divided between “IsTargetCountry()” and “IsDamDesalinationPlant()”. The “IsTargetCountry()” function retrieves the local IPv4 address, converts it to a numeric value, and compares it against each of the hardcoded ranges stored in “ipRanges”. Only if the address falls within one of these ranges does the code move on to next string-comparison step, which ultimately determines whether the country check succeeded.
Figure 8: The main target validation function.
Figure 9 : The “IsTargetCountry” function.
“IsDamDesalinationPlant()” then assesses whether the host resembles a relevant OT environment. It first scans running process names for the hardcoded strings previously mentioned, followed by checks for the presence of any of the hardcoded directories or files. The intended logic is clear: the payload activates only when both a geographic condition and an environment specific condition related to desalination or water treatment are met.
Figure. 10: An excerpt of the list of strings used in the “IsDamDesalinationPlant” function
Why this version appears dysfunctional
Although the file contains sabotage, scanning, and propagation functions, the current sample appears unable to satisfy its own target-country checking function even when the reported IP falls within the specified ranges. In the static constructor, every “ipRanges” entry is associated with the same decoded string, “Nqvbdk”, derived from “TnF2YmRr”. Later, “IsTargetCountry()” (shown in Figure 8) compares that stored value against “EncryptDecrypt("Israel", 5)”.
Figure 11: The “EncryptDecrypt” function
As implemented, “EncryptDecrypt("Israel", 5)” does not produce “Nqvbdk”, it produces a different string. This function seems to be a basic XOR encode/decode routine, XORing the string “Israel” with value of 5. Because the resulting output does not match “Nqvbdk” the comparison always fails, even when the host IP falls within one of the specified ranges. As a result, this build appears to consistently determine that the device is not a valid target. This behavior suggests that the version is either intentionally disabled, incorrectly configured, or left in an unfinished state. In fact, there is no XOR key that would transform “Israel” into “Nqvbdk” using this function.
Self-destruct function
Figure 12: The “SelfDestruct” function
If IsTargetCountry() returns false, the malware invokes “SelfDestruct()”. This routine removes the SystemHealthCheck value from “HKCU\Software\Microsoft\Windows\CurrentVersion\Run”, writes a log file to “%TEMP%\target_verify.log” containing the message “Target not matched. Operation restricted to IL ranges. Self-destruct initiated.” and creates the batch file “%TEMP%\delete.bat”. This file repeatedly attempts to delete the malware’s executable, before deleting itself.
Local configuration file tampering
If the malware determines that the system it is on is a valid target, its first action is local file tampering. “IncreaseChlorineLevel()” checks a hardcoded list of configuration files associated with desalination, reverse osmosis, chlorine control, and water treatment OT/Industrial Control Systems (ICS). As soon as it finds any one of these file present, it appends a fixed block of text to it and returns immediately.
Figure 13: The block of text appended to relevant configuration files.
The appended block of text contains the following entries: “Chlorine_Dose=10”, “Chlorine_Pump=ON”, “Chlorine_Flow=MAX”, “Chlorine_Valve=OPEN”, and “RO_Pressure=80”. Only if none of the hardcoded files are found does the malware proceed to its network-based OT discovery logic.
OT discovery and protocol logic
This section of the code attempts to identify devices on the local subnet, assign each one a protocol label, and then attempt protocol-specific communication. While the overall structure is consistent across protocols, the implementation quality varies significantly.
Figure 14: The ICS scanning function.
The discovery routine, “UZJctUZJctUZJct()”, obtains the local IPv4 address, reduces it to a /24 prefix, and iterates across hosts 1 through 255. For each host, it probes ports 502 (Modbus), 20000 (DNP3), and 102 (S7comm), which the code labels as “Modbus”, “DNP3”, and “S7” respectively if a valid response is received on the relevant port.
The probing is performed in parallel. For every “ip:port” combination, the code creates a task and attempts a TCP connection. The “100 ms” value in the probe routine is a per-connection timeout on “WaitOne(100, ...)”, rather than a delay between hosts or protocols. In practice, this results in a burst of short-lived OT-focused connection attempts across the local subnet.
Protocol validation and device classification
When a connection succeeds, the malware does not stop at the open port. It records the endpoint as an “ICSDevice” with an IP address, port, and protocol label. It then performs a second-stage validation by writing a NULL byte to the remote stream and reading the response that comes back.
For Modbus, the malware checks whether the first byte of the reply is between 1 and 255, for DNP3, it checks whether the first two bytes are “05 64”, and for S7comm, it checks whether the first byte is “03”. These checks are not advanced parsers, but they do show that the author understood the protocols well enough to add lightweight confirmation before sending follow-on data.
Figure 15: The Modbus read request along with unfinished code for additional protocols.
The most developed OT-specific logic is the Modbus-oriented path. In the function “IncreaseChlorineLevel(string targetIP, int targetPort, string parameter)”, the malware connects to the target and sends “01 03 00 00 00 0A”. It then reads the response and parses register values in pairs. The code then uses some basic logic to select a register index: for “Chlorine_Dose”, it looks for values greater than 0 and less than 1000; for “Turbine_Speed”, it looks for values greater than 100.
The Modbus command observed in the sample (01 03 00 00 00 0A) is a Read Holding Registers request. The first byte (0x01) represents the unit identifier, which in traditional Modbus RTU specifies the addressed slave device; in Modbus TCP, however, this value is often ignored or used only for gateway routing because device addressing is handled at the IP/TCP layer.
The second byte (0x03) is the Modbus function code indicating a Read Holding Registers request. The following two bytes (0x00 0x00) specify the starting register address, indicating that the read begins at address zero. The final two bytes (0x00 0A) define the number of registers to read, in this case ten consecutive registers. Taken together, the command requests the contents of the first ten holding registers from the target device and represents a valid, commonly used Modbus operation.
If a plausible register is found, the malware builds a six-byte Modbus write using function code “6” (Write)” and sets the value to 100 for “Chlorine_Dose”, or 0 for any other parameter. If no plausible register is found, it falls back to using hardcoded write frames. In the main malware path, however, the code only calls this function with “Chlorine_Dose".
If none of the ten registers meets the expected criteria, the malware does not abandon the operation. Instead, it defaults to a set of hardcoded Modbus write frames that specify predetermined register addresses and values. This behavior suggests that the attacker had only partial knowledge of the target environment. The initial register-scanning logic appears to be an attempt at dynamic discovery, while the fallback logic ensures that a write operation is still attempted even if that discovery fails.
Incomplete DNP3 and S7comm Logic
The DNP3 and S7comm branches appear much less complete. In “GetCommand()”, the DNP3 path returns the fixed byte sequence “05 64 0A 0C 01 02”, while the S7comm path returns “03 00 00 13 0E 00”. Neither sequence resembles a fully formed command for the respective protocol.
In the case of the S7comm section, the five byte‑ sequence found in the malware sample (05 00 1C 22 1E) most closely matches the beginning of an S7comm parameter block, specifically the header of a “WriteVar (0x05)” request, which is the S7comm equivalent of a Modbus register write operation. In the S7comm protocol, the first byte of a parameter block identifies the function code, but the remaining bytes in this case do not form a valid item definition. A vaild S7 WriteVar parameter requires at least one item and a full 11-byte variable-specification structure. By comparison this 5‑ byte array is far too short to be a complete or usable command.
The zero item count (0x00) and the trailing three bytes appear to be either uninitialized data or the beginning of an incomplete address field. Together, these details suggest that the attacker likely intended to implement S7 WriteVar functionality, like the Modbus function, but left this portion of the code unfinished.
The DNP3 branch of the malware also appears to be only partially implemented. The byte sequence returned by the DNP3 path (05 64 0A 0C 01 02) begins with the correct two‑byte DNP3 link‑layer sync header (0x05 0x64) and includes additional bytes that resemble the early portion of a link‑layer header. However, the sequence is far too short to constitute a valid DNP3 frame. It lacks the required destination and source address fields, the 16‑bit CRC blocks, and any application‑layer payload in which DNP3 function code would reside. As a result, this fragment does not represent a meaningful DNP3 command.
The incomplete S7 and DNP3 fragments suggest that these protocol branches were still in a developmental or experimental state when the malware was compiled. Both contain protocol‑accurate prefixes, indicating an intent to implement multi‑protocol OT capabilities, however for reasons unknow, these sections were not fully implemented or could not be completed prior to deployment.
USB Propagation
The malware also includes a removable-media propagation mechanism. The “sdfsdfsfsdfsdfqw()” function scans for drives, selects those identified as removable, and copies the hidden payload to each one as “svchost.exe” if it is not already present. The copied executable is marked with the “Hidden” and “System” attributes to reduce visibility.
The malware then calls “CreateUSBShortcut()”, which uses “WScript.Shell” to create .lnk files for each file in the removable drive root. Each shortcut’s TargetPath is set to the hidden malware copy, the icon is set to “shell32.dll, 4” (this is the windows genericfile icon), and the original file is hidden. Were a victim to click this “file,” they would unknowingly run the malware.
Figure 14:The creation of the shortcut on the USB device.
Key Insights
ZionSiphon represents a notable, though incomplete, attempt to build malware capable of malicious interaction with OT systems targeting water treatment and desalination environments.
While many of ZionSiphon’s individual capabilities align with patterns commonly found in commodity malware, the combination of politically motivated messaging, Israel‑specific IP targeting, and an explicit focus on desalination‑related processes distinguishes it from purely opportunistic threats. The inclusion of Modbus sabotage logic, filesystem tampering targeting chlorine and pressure control, and subnet‑wide ICS scanning demonstrates a clear intent to interact directly with industrial processes controllers and to cause significant damage and potential harm, rather than merely disrupt IT endpoints.
At the same time, numerous implementation flaws, most notably the dysfunctional country‑validation logic and the placeholder DNP3 and S7comm components, suggest that analyzed version is either a development build, a prematurely deployed sample, or intentionally defanged for testing purposes. Despite these limitations, the overall structure of the code likely indicates a threat actor experimenting with multi‑protocol OT manipulation, persistence within operational networks, and removable‑media propagation techniques reminiscent of earlier ICS‑targeting campaigns.
Even in its unfinished state, ZionSiphon underscores a growing trend in which threat actors are increasingly experimenting with OT‑oriented malware and applying it to the targeting of critical infrastructure. Continued monitoring, rapid anomaly detection, and cross‑visibility between IT and OT environments remain essential for identifying early‑stage threats like this before they evolve into operationally viable attacks.
Credit to Calum Hall (Cyber Analyst) Edited by Ryan Traill (Content Manager)